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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015890201.1_cds_XP_016444867.1_39881
CDS Infomation

[gene=LOC107770113] [db_xref=GeneID:107770113] [protein=putative threonine aspartase isoform X4] [protein_id=XP_016444867.1] [location=complement(join(5164..5185,5906..5937,6112..6235,6376..6539,7704..7870,8769..8913,9602..9683,10561..10645,10812..10932,11952..12002,12096..12239))] [gbkey=CDS]
Sequence

ATGGCTGCCGAAGTTGCTGAGGAGACTTCAACATTCTTCGTTGCCGTACACGTCGGCGCC
GGATATCACGCGCCGTCGAATGAGAAAGCTCTTCGTTCAGTCATGAAACGGGCATGCCTC
GCCGCTGATTCGGTTCTCCGAAAGGGTCCAGGTGGATGTATAGACGCTGTAACGGCTGCG
ATTCAAGTCTTAGAGGATGATCCTAACACAAATGCTGGTCGAGGTTCAAACTTGACTGAA
TATGGTCATGTTGAGTGTGATGCCAGCATCATGGATGGTGATTCTGGCACATTTGGTGCT
GTAGGTGCAGTGCCAGGTGTGAGAAATTCCATTCAGATTGCAGCTTTGTTGGTCAAGGAA
CAGATGTCTGGTTCACCACTTCTGGGACGAATATCTCCAATGTTTTTGGTTGGTGAAGGT
GCTCGTACATGGGCAATGTCCAGAGGCATTGTTTCTCCATCAACTGTGTCAGAGGCTGAA
GAGCTTGTTTTGTGGAGACAGTGGCTTGTGACTGAGAGGGCCAGAACCCAATGGAAAAGG
TACAAAGGGATGCTTGATGATGCCAAGGATGTTAATGACGCTTCTGCCACTAAGATGGCA
CACCCTAAGGAATCTGGTACAGTATCAGATACTCCAGAAGTAGATAATCAATCAAGAGGA
AATGGAGGAATAAATCATATCTCAATGCTTGGTGCATTAGACGAAGACTTTATTTCTGAC
ACAGTTGGAGTTATCTGTGTCGATACAGAAGGACATATAGCTTGTGGGTCCTCAAGTGGT
GGTATAGCTTTGAAGGTTGGTGGACGTGTGGGTCTAGCGGCAATGTATGGTTCTGGTTGT
TGGGCGTCTTCAAAGGGACCTTTCGGCGCTCCTTTTATAGTTGGATGTTGTGTCAGTGGT
TCTGGAGAGCACCTAATGAGAGGATTTGCTGCTCGGGAATGCTGTGTTTCGTCAGCACTG
TCTCAAGCTGGGCCATCTTCTGCCTGTAAAAAAGTTTTACACTCTGTTGTTCAGGAGAAT
AGTCAGTGTGGCACTGAAAGTAGTGCTGGCATCCTACTAGTTCAAGCAGAATCTCCTAGA
ATGGTTATTTTGGCAGCTCAATGGAGAGGCCCAAGGTTTCAGTGCTTAGGAGTATAA

Peptide Sequence

PEP ID

XP_016444867.1
PEP Infomation

PREDICTED: putative threonine aspartase isoform X4 [Nicotiana tabacum]
Sequence

MAAEVAEETSTFFVAVHVGAGYHAPSNEKALRSVMKRACLAADSVLRKGPGGCIDAVTAA
IQVLEDDPNTNAGRGSNLTEYGHVECDASIMDGDSGTFGAVGAVPGVRNSIQIAALLVKE
QMSGSPLLGRISPMFLVGEGARTWAMSRGIVSPSTVSEAEELVLWRQWLVTERARTQWKR
YKGMLDDAKDVNDASATKMAHPKESGTVSDTPEVDNQSRGNGGINHISMLGALDEDFISD
TVGVICVDTEGHIACGSSSGGIALKVGGRVGLAAMYGSGCWASSKGPFGAPFIVGCCVSG
SGEHLMRGFAARECCVSSALSQAGPSSACKKVLHSVVQENSQCGTESSAGILLVQAESPR
MVILAAQWRGPRFQCLGV

Transcript Sequence

Gene sequence data has not been registered.